high-throughput bar-coded pyrosequencing Search Results


barcoded pyrosequencing  (Pyrosequencing Inc)
86
Pyrosequencing Inc barcoded pyrosequencing
Barcoded Pyrosequencing, supplied by Pyrosequencing Inc, used in various techniques. Bioz Stars score: 86/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
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barcoded primers  (Pyrosequencing Inc)
86
Pyrosequencing Inc barcoded primers
Barcoded Primers, supplied by Pyrosequencing Inc, used in various techniques. Bioz Stars score: 86/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
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barcoded 16s rrna pyrosequencing immunoassays  (Pyrosequencing Inc)
86
Pyrosequencing Inc barcoded 16s rrna pyrosequencing immunoassays
Barcoded 16s Rrna Pyrosequencing Immunoassays, supplied by Pyrosequencing Inc, used in various techniques. Bioz Stars score: 86/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
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coi mini barcodes  (Pyrosequencing Inc)
86
Pyrosequencing Inc coi mini barcodes
Figure 1. Neighbor-joining (NJ) trees based on Kimura-2-Parameter (K2P) distances for <t>cytochrome</t> <t>c</t> <t>oxidase</t> <t>I</t> <t>(COI)</t> mini-barcodes of old museum Lepidoptera specimens. The red markers indicate the position of generated pyrosequences in comparison to the reference library, with blue markers, from BOLD or Genbank. Collection dates are shown in parentheses. doi:10.1371/journal.pone.0021252.g001
Coi Mini Barcodes, supplied by Pyrosequencing Inc, used in various techniques. Bioz Stars score: 86/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
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Average 86 stars, based on 1 article reviews
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barcoded amplicon sequencing  (INFINIUM Inc)
90
INFINIUM Inc barcoded amplicon sequencing
Figure 1. Neighbor-joining (NJ) trees based on Kimura-2-Parameter (K2P) distances for <t>cytochrome</t> <t>c</t> <t>oxidase</t> <t>I</t> <t>(COI)</t> mini-barcodes of old museum Lepidoptera specimens. The red markers indicate the position of generated pyrosequences in comparison to the reference library, with blue markers, from BOLD or Genbank. Collection dates are shown in parentheses. doi:10.1371/journal.pone.0021252.g001
Barcoded Amplicon Sequencing, supplied by INFINIUM Inc, used in various techniques. Bioz Stars score: 90/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
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dna pyrosequencing  (Pyrosequencing Inc)
86
Pyrosequencing Inc dna pyrosequencing
Figure 1. Neighbor-joining (NJ) trees based on Kimura-2-Parameter (K2P) distances for <t>cytochrome</t> <t>c</t> <t>oxidase</t> <t>I</t> <t>(COI)</t> mini-barcodes of old museum Lepidoptera specimens. The red markers indicate the position of generated pyrosequences in comparison to the reference library, with blue markers, from BOLD or Genbank. Collection dates are shown in parentheses. doi:10.1371/journal.pone.0021252.g001
Dna Pyrosequencing, supplied by Pyrosequencing Inc, used in various techniques. Bioz Stars score: 86/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
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massarray  (INFINIUM Inc)
90
INFINIUM Inc massarray
Figure 1. Neighbor-joining (NJ) trees based on Kimura-2-Parameter (K2P) distances for <t>cytochrome</t> <t>c</t> <t>oxidase</t> <t>I</t> <t>(COI)</t> mini-barcodes of old museum Lepidoptera specimens. The red markers indicate the position of generated pyrosequences in comparison to the reference library, with blue markers, from BOLD or Genbank. Collection dates are shown in parentheses. doi:10.1371/journal.pone.0021252.g001
Massarray, supplied by INFINIUM Inc, used in various techniques. Bioz Stars score: 90/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
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gs flx titanium series  (Pyrosequencing Inc)
86
Pyrosequencing Inc gs flx titanium series
Figure 1. Neighbor-joining (NJ) trees based on Kimura-2-Parameter (K2P) distances for <t>cytochrome</t> <t>c</t> <t>oxidase</t> <t>I</t> <t>(COI)</t> mini-barcodes of old museum Lepidoptera specimens. The red markers indicate the position of generated pyrosequences in comparison to the reference library, with blue markers, from BOLD or Genbank. Collection dates are shown in parentheses. doi:10.1371/journal.pone.0021252.g001
Gs Flx Titanium Series, supplied by Pyrosequencing Inc, used in various techniques. Bioz Stars score: 86/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
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high throughput dna sequencing  (Illumina Inc)
97
Illumina Inc high throughput dna sequencing
Ploidy of isolates and spore clones. (A) Representative flow cytometry plots of YJS5845 (left), YJS5885 (right), and derived spore clones. All spore clones of YJS5845 and YJS5885 tested were diploid and haploid, respectively. The black arrows show the position of 1n, 2n, and 4n <t>DNA</t> content. Inset shows percentage of single cells, small-budded cells, and large-budded cells assessed by light microscopy. (B) Whole-genome <t>sequencing</t> was performed for YJS5845 and spore clones (Materials and Methods). YJS5845, and spore clones 5845-18a and 5845-28b, displayed aneuploidy for chromosomes (Chr) XIV, XI, and I, respectively.
High Throughput Dna Sequencing, supplied by Illumina Inc, used in various techniques. Bioz Stars score: 97/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
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probiotic enterococcus faecium ncimb 11181  (NCIMB Ltd)
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NCIMB Ltd probiotic enterococcus faecium ncimb 11181
Ploidy of isolates and spore clones. (A) Representative flow cytometry plots of YJS5845 (left), YJS5885 (right), and derived spore clones. All spore clones of YJS5845 and YJS5885 tested were diploid and haploid, respectively. The black arrows show the position of 1n, 2n, and 4n <t>DNA</t> content. Inset shows percentage of single cells, small-budded cells, and large-budded cells assessed by light microscopy. (B) Whole-genome <t>sequencing</t> was performed for YJS5845 and spore clones (Materials and Methods). YJS5845, and spore clones 5845-18a and 5845-28b, displayed aneuploidy for chromosomes (Chr) XIV, XI, and I, respectively.
Probiotic Enterococcus Faecium Ncimb 11181, supplied by NCIMB Ltd, used in various techniques. Bioz Stars score: 90/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
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ampliseq deep sequencing technology  (Illumina Inc)
99
Illumina Inc ampliseq deep sequencing technology
Ploidy of isolates and spore clones. (A) Representative flow cytometry plots of YJS5845 (left), YJS5885 (right), and derived spore clones. All spore clones of YJS5845 and YJS5885 tested were diploid and haploid, respectively. The black arrows show the position of 1n, 2n, and 4n <t>DNA</t> content. Inset shows percentage of single cells, small-budded cells, and large-budded cells assessed by light microscopy. (B) Whole-genome <t>sequencing</t> was performed for YJS5845 and spore clones (Materials and Methods). YJS5845, and spore clones 5845-18a and 5845-28b, displayed aneuploidy for chromosomes (Chr) XIV, XI, and I, respectively.
Ampliseq Deep Sequencing Technology, supplied by Illumina Inc, used in various techniques. Bioz Stars score: 99/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
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ampliseq deep sequencing technology - by Bioz Stars, 2026-05
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tagged-amplicon deep sequencing enhanced tam-seq  (Inivata Inc)
90
Inivata Inc tagged-amplicon deep sequencing enhanced tam-seq
Ploidy of isolates and spore clones. (A) Representative flow cytometry plots of YJS5845 (left), YJS5885 (right), and derived spore clones. All spore clones of YJS5845 and YJS5885 tested were diploid and haploid, respectively. The black arrows show the position of 1n, 2n, and 4n <t>DNA</t> content. Inset shows percentage of single cells, small-budded cells, and large-budded cells assessed by light microscopy. (B) Whole-genome <t>sequencing</t> was performed for YJS5845 and spore clones (Materials and Methods). YJS5845, and spore clones 5845-18a and 5845-28b, displayed aneuploidy for chromosomes (Chr) XIV, XI, and I, respectively.
Tagged Amplicon Deep Sequencing Enhanced Tam Seq, supplied by Inivata Inc, used in various techniques. Bioz Stars score: 90/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
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Image Search Results


Figure 1. Neighbor-joining (NJ) trees based on Kimura-2-Parameter (K2P) distances for cytochrome c oxidase I (COI) mini-barcodes of old museum Lepidoptera specimens. The red markers indicate the position of generated pyrosequences in comparison to the reference library, with blue markers, from BOLD or Genbank. Collection dates are shown in parentheses. doi:10.1371/journal.pone.0021252.g001

Journal: PloS one

Article Title: Pyrosequencing for mini-barcoding of fresh and old museum specimens.

doi: 10.1371/journal.pone.0021252

Figure Lengend Snippet: Figure 1. Neighbor-joining (NJ) trees based on Kimura-2-Parameter (K2P) distances for cytochrome c oxidase I (COI) mini-barcodes of old museum Lepidoptera specimens. The red markers indicate the position of generated pyrosequences in comparison to the reference library, with blue markers, from BOLD or Genbank. Collection dates are shown in parentheses. doi:10.1371/journal.pone.0021252.g001

Article Snippet: Supporting Information Table S1 Fresh Lepidoptera specimens used for testing the Pyrosequencing approach for COI mini-barcodes. (DOCX) Table S2 Old museum Lepidoptera specimens used for testing the Pyrosequencing approach for COI mini-barcodes. (DOCX)

Techniques: Generated, Comparison

Ploidy of isolates and spore clones. (A) Representative flow cytometry plots of YJS5845 (left), YJS5885 (right), and derived spore clones. All spore clones of YJS5845 and YJS5885 tested were diploid and haploid, respectively. The black arrows show the position of 1n, 2n, and 4n DNA content. Inset shows percentage of single cells, small-budded cells, and large-budded cells assessed by light microscopy. (B) Whole-genome sequencing was performed for YJS5845 and spore clones (Materials and Methods). YJS5845, and spore clones 5845-18a and 5845-28b, displayed aneuploidy for chromosomes (Chr) XIV, XI, and I, respectively.

Journal: Genetics

Article Title: Incompatibilities in Mismatch Repair Genes MLH1-PMS1 Contribute to a Wide Range of Mutation Rates in Human Isolates of Baker’s Yeast

doi: 10.1534/genetics.118.301550

Figure Lengend Snippet: Ploidy of isolates and spore clones. (A) Representative flow cytometry plots of YJS5845 (left), YJS5885 (right), and derived spore clones. All spore clones of YJS5845 and YJS5885 tested were diploid and haploid, respectively. The black arrows show the position of 1n, 2n, and 4n DNA content. Inset shows percentage of single cells, small-budded cells, and large-budded cells assessed by light microscopy. (B) Whole-genome sequencing was performed for YJS5845 and spore clones (Materials and Methods). YJS5845, and spore clones 5845-18a and 5845-28b, displayed aneuploidy for chromosomes (Chr) XIV, XI, and I, respectively.

Article Snippet: DNA was barcoded using Illumina Nextera XT and high-throughput DNA sequencing was performed on an Illumina NextSeq500 at the Cornell Biotechnology Resource Center, achieving a 50-fold mean coverage.

Techniques: Clone Assay, Flow Cytometry, Derivative Assay, Light Microscopy, Sequencing